STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC58419.1Uncharacterized conserved protein PhnB, glyoxalase superfamily. (171 aa)    
Predicted Functional Partners:
SKC58428.1
Helix-turn-helix domain-containing protein.
 
    0.775
SKC67729.1
Transcriptional regulator, AraC family with amidase-like domain.
  
    0.755
SKC68652.1
Uncharacterized conserved protein PhnB, glyoxalase superfamily.
  
 
  0.729
SKC78393.1
Transcriptional regulator, HxlR family.
   
    0.697
SKC58440.1
YidC/Oxa1 family membrane protein insertase.
       0.588
SKC58408.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
  
    0.560
SKC78461.1
Phosphotransferase enzyme family protein.
  
     0.549
cobB
NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
  
    0.483
SKC36293.1
Transcriptional attenuator, LytR family.
   
    0.420
SKC38843.1
Transcriptional attenuator, LytR family.
   
    0.420
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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