STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC58964.1Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family. (244 aa)    
Predicted Functional Partners:
SKC58975.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
       0.615
SKC58921.1
Helix-turn-helix domain-containing protein.
       0.588
SKC58951.1
Major Facilitator Superfamily protein.
       0.588
SKC58909.1
Cobalt-zinc-cadmium efflux system protein.
   
 
 0.526
SKC58901.1
DNA-binding transcriptional regulator, ArsR family.
 
     0.506
SKC58986.1
Protein of unknown function.
       0.498
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.