STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC59073.1UDP-glucose 4-epimerase. (367 aa)    
Predicted Functional Partners:
SKC60659.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 0.878
SKC50844.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 0.876
SKC71058.1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.727
SKC71145.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
  
 
0.697
SKC36021.1
UDP-galactopyranose mutase.
    
 0.689
SKC38986.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.659
SKC38870.1
UDPglucose 6-dehydrogenase.
  
 
 0.573
SKC40555.1
UDPglucose 6-dehydrogenase.
  
 
 0.573
SKC59065.1
DNA helicase IV.
       0.536
SKC40137.1
Nucleoside-diphosphate-sugar epimerase.
   
  0.529
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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