Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC52494.1 | SKC65846.1 | SAMN04324258_1543 | SAMN04324258_2261 | Hypothetical protein. | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | 0.551 |
SKC52494.1 | SKC80840.1 | SAMN04324258_1543 | SAMN04324258_4103 | Hypothetical protein. | SH3 domain-containing protein. | 0.618 |
SKC59444.1 | SKC65846.1 | SAMN04324258_1892 | SAMN04324258_2261 | Lysozyme. | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | 0.571 |
SKC65841.1 | SKC65846.1 | SAMN04324258_2260 | SAMN04324258_2261 | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | 0.505 |
SKC65846.1 | SKC52494.1 | SAMN04324258_2261 | SAMN04324258_1543 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | Hypothetical protein. | 0.551 |
SKC65846.1 | SKC59444.1 | SAMN04324258_2261 | SAMN04324258_1892 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | Lysozyme. | 0.571 |
SKC65846.1 | SKC65841.1 | SAMN04324258_2261 | SAMN04324258_2260 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | 0.505 |
SKC65846.1 | SKC78979.1 | SAMN04324258_2261 | SAMN04324258_3877 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | Animal haem peroxidase. | 0.414 |
SKC65846.1 | SKC80840.1 | SAMN04324258_2261 | SAMN04324258_4103 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | SH3 domain-containing protein. | 0.479 |
SKC78979.1 | SKC65846.1 | SAMN04324258_3877 | SAMN04324258_2261 | Animal haem peroxidase. | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | 0.414 |
SKC80840.1 | SKC52494.1 | SAMN04324258_4103 | SAMN04324258_1543 | SH3 domain-containing protein. | Hypothetical protein. | 0.618 |
SKC80840.1 | SKC65846.1 | SAMN04324258_4103 | SAMN04324258_2261 | SH3 domain-containing protein. | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | 0.479 |