STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC68881.1Two component transcriptional regulator, LuxR family. (218 aa)    
Predicted Functional Partners:
SKC68884.1
Histidine kinase.
 
 0.888
SKC42188.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.869
SKC58705.1
Signal transduction histidine kinase.
 
  0.798
SKC48077.1
Signal transduction histidine kinase.
 
  0.774
SKC67766.1
Signal transduction histidine kinase.
 
  0.765
SKC39912.1
Signal transduction histidine kinase.
 
  0.743
SKC41697.1
Signal transduction histidine kinase.
  
  0.735
SKC74347.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  0.722
SKC42798.1
Signal transduction histidine kinase.
  
  0.721
SKC36836.1
Signal transduction histidine kinase.
  
  0.720
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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