STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC71788.1DoxX protein. (184 aa)    
Predicted Functional Partners:
SKC52181.1
Helix-turn-helix domain-containing protein.
  
     0.527
SKC71773.1
Predicted phosphohydrolase, Cof family, HAD superfamily.
       0.516
SKC37587.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.510
SKC81114.1
Hypothetical protein.
  
     0.473
SKC66736.1
Trehalase.
  
     0.464
SKC37563.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.432
SKC34737.1
Sugar phosphate isomerase/epimerase.
  
     0.427
SKC59542.1
Uncharacterized conserved protein.
  
     0.413
SKC71793.1
FMN reductase.
       0.404
SKC71797.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
       0.404
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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