STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC71964.1Polar amino acid transport system substrate-binding protein. (344 aa)    
Predicted Functional Partners:
SKC71981.1
Polar amino acid transport system permease protein.
  0.965
SKC71969.1
Polar amino acid transport system ATP-binding protein.
 0.941
SKC79248.1
Glutamate transport system permease protein.
 
 0.920
SKC81614.1
Polar amino acid transport system permease protein.
  0.888
SKC79243.1
Glutamate transport system permease protein.
 
 0.824
SKC71986.1
Hypothetical protein.
 
     0.790
SKC81608.1
Polar amino acid transport system ATP-binding protein.
 0.775
SKC71943.1
Alkanesulfonate monooxygenase.
 
    0.717
SKC51302.1
Polar amino acid transport system ATP-binding protein.
 0.685
SKC79256.1
Glutamate transport system ATP-binding protein.
 0.679
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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