STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC72877.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
SKC72870.1
DNA gyrase subunit B.
 
     0.699
SKC77840.1
Superfamily II DNA or RNA helicase.
  
     0.646
SKC68288.1
Protein of unknown function.
  
     0.636
SKC72603.1
Protein of unknown function.
  
     0.576
SKC68771.1
Protein of unknown function.
  
     0.544
SKC72619.1
Protein of unknown function.
  
     0.539
SKC79412.1
Protein of unknown function.
  
     0.522
SKC69020.1
Protein of unknown function.
  
     0.508
SKC72419.1
Protein of unknown function.
  
     0.505
SKC71244.1
MerR HTH family regulatory protein.
  
     0.488
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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