STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC74766.1GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex. (249 aa)    
Predicted Functional Partners:
SKC38740.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.775
SKC67759.1
Transcriptional regulator, GntR family.
  
  
 0.773
SKC75227.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.773
SKC81571.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.757
SKC81314.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.751
SKC74760.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.708
SKC62478.1
DNA-binding transcriptional regulator, GntR family.
  
     0.696
SKC80628.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.576
SKC74791.1
Glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.562
SKC74784.1
Multiple sugar transport system permease protein.
  
    0.503
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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