STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC75937.14-carboxymuconolactone decarboxylase. (139 aa)    
Predicted Functional Partners:
SKC75934.1
DNA-binding transcriptional regulator, MerR family.
 
     0.936
SKC81065.1
3-carboxy-cis,cis-muconate cycloisomerase.
  
 
 0.848
SKC57699.1
DNA-binding transcriptional regulator, MerR family.
 
     0.688
SKC42320.1
Cupin domain protein.
 
  
 0.662
SKC79216.1
ATP-dependent helicase Lhr and Lhr-like helicase.
 
      0.636
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family.
       0.543
SKC75942.1
Protein-tyrosine phosphatase.
       0.523
SKC49576.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.439
SKC46255.1
3-oxoacid CoA-transferase subunit B.
  
 
 0.430
SKC46249.1
3-oxoacid CoA-transferase subunit A.
  
 
 0.422
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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