STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC78014.13-hydroxyisobutyrate dehydrogenase. (299 aa)    
Predicted Functional Partners:
SKC72431.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.734
SKC51351.1
2-hydroxy-3-oxopropionate reductase.
  
     0.732
SKC65298.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 
 0.692
SKC78008.1
Transcriptional regulator, HxlR family.
 
     0.593
SKC72667.1
Acyl-CoA synthetase (NDP forming).
    
  0.574
SKC78461.1
Phosphotransferase enzyme family protein.
  
     0.561
SKC65313.1
Tartronate-semialdehyde synthase; Belongs to the TPP enzyme family.
  
 
 0.547
SKC36859.1
Streptomycin 6-kinase.
  
     0.524
SKC56760.1
Transcriptional regulator, TetR family.
  
     0.508
SKC76394.1
Transcriptional regulator, TetR family.
  
     0.481
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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