STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC78347.1ABC-2 type transport system ATP-binding protein. (321 aa)    
Predicted Functional Partners:
SKC78341.1
ABC-2 type transport system permease protein.
     0.946
SKC37014.1
ABC-2 type transport system permease protein.
 
     0.771
SKC78337.1
Hypothetical protein.
  
    0.687
SKC67150.1
Hypothetical protein.
  
  0.587
SKC78334.1
Uncharacterized HhH-GPD family protein.
       0.549
SKC57535.1
Hypothetical protein.
  
  0.544
SKC78353.1
Hypothetical protein.
       0.538
SKC81505.1
Branched-chain amino acid transport system ATP-binding protein.
 
   
 
0.509
SKC40992.1
ABC-2 type transport system permease protein.
   
  0.503
SKC65577.1
ABC-2 type transport system permease protein.
   
  0.503
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.