STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC79131.1Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (488 aa)    
Predicted Functional Partners:
SKC70610.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.861
SKC52485.1
Citrate synthase; Belongs to the citrate synthase family.
   
 0.809
SKC52664.1
Succinate dehydrogenase subunit A.
   
  0.796
SKC49459.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.788
SKC35468.1
2-oxoglutarate dehydrogenase E1 component.
   
 0.785
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
    
 0.767
SKC52655.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
 0.763
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
 0.760
mqo
Malate dehydrogenase (quinone); Manually curated.
   
 
  0.757
SKC52688.1
Succinate dehydrogenase subunit C; Manually curated.
   
 
  0.750
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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