STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC79577.1Simple sugar transport system ATP-binding protein. (542 aa)    
Predicted Functional Partners:
SKC79573.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.982
SKC79581.1
Basic membrane protein A.
 
 
 0.971
SKC52734.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.970
SKC52744.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.969
SKC79569.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.965
SKC52715.1
Basic membrane protein A.
 
 
 0.959
SKC34761.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.811
SKC50562.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.479
SKC79564.1
Ornithine cyclodeaminase.
  
    0.446
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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