STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC79618.1Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. (182 aa)    
Predicted Functional Partners:
SKC70875.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.928
SKC70610.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.719
SKC49912.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
  
  
 0.713
SKC34906.1
Nitrite reductase (NADH) large subunit; Manually curated; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.673
SKC34918.1
Assimilatory nitrate reductase electron transfer subunit.
  
 0.673
SKC40500.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 0.673
SKC50251.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.673
SKC62507.1
Thioredoxin reductase.
  
 0.673
SKC34946.1
Respiratory nitrate reductase beta subunit.
  
 
 0.609
SKC73063.1
Ubiquinol-cytochrome c reductase cytochrome b subunit.
  
 
  0.599
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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