STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC79685.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
SKC52673.1
Succinate dehydrogenase / fumarate reductase membrane anchor subunit.
  
     0.775
SKC52688.1
Succinate dehydrogenase subunit C; Manually curated.
  
     0.775
SKC72378.1
Cell division protein ZapE.
  
     0.775
SKC79029.1
Hypothetical protein.
  
     0.774
SKC71332.1
Hypothetical protein.
  
     0.768
SKC52655.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
     0.736
SKC52664.1
Succinate dehydrogenase subunit A.
  
     0.687
SKC79682.1
Hypothetical protein.
       0.642
SKC79688.1
Catalase; Belongs to the catalase family.
       0.536
SKC79678.1
Trypsin-like peptidase domain-containing protein.
       0.531
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.