STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC80896.1Predicted arabinose efflux permease, MFS family. (433 aa)    
Predicted Functional Partners:
SKC56811.1
Conserved hypothetical protein.
  
     0.564
SKC80894.1
Uncharacterized membrane protein YczE.
       0.552
SKC80878.1
Excalibur calcium-binding domain-containing protein.
 
     0.517
SKC61597.1
FHA domain-containing protein.
  
     0.446
SKC80891.1
Hypothetical protein.
       0.432
SKC79119.1
Predicted N-acetyltransferase YhbS.
  
     0.424
SKC67975.1
Calcineurin-like phosphoesterase superfamily domain-containing protein.
  
     0.419
SKC35099.1
Hypothetical protein.
  
     0.410
SKC69119.1
Protein of unknown function.
  
     0.404
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.