STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_00050Transposase DDE domain protein. (458 aa)    
Predicted Functional Partners:
ACWI_09500
Hypothetical protein; RecF/RecN/SMC N terminal domain.
  
  
 0.841
ACWI_00030
Integrase core domain protein.
  
  
 0.819
ACWI_19050
Fibronectin-binding protein A N-terminus (FbpA).
  
  
 0.819
ACWI_10500
IS66 Orf2 like protein.
  
     0.628
ACWI_10510
Transposase IS66 family protein.
  
     0.609
ACWI_33550
Hypothetical protein.
  
   
 0.545
ACWI_11340
Putative type I restriction enzymeP M protein.
   
    0.444
hsdM
Type I restriction enzyme EcoKI M protein.
   
    0.444
ACWI_20480
Putative type I restriction enzymeP M protein.
   
    0.444
ACWI_20820
N-6 DNA methylase.
   
    0.444
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.