STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pglF_1UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase. (622 aa)    
Predicted Functional Partners:
ywqD_2
Tyrosine-protein kinase YwqD.
  
 
 0.918
cap8A_1
Capsular polysaccharide type 8 biosynthesis protein cap8A.
  
 
 0.879
epsN
Putative pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.850
epsM
Putative acetyltransferase EpsM.
  
 
 0.811
ywqD_1
Tyrosine-protein kinase YwqD.
  
 
 0.787
fdtB
dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.780
pglE
UDP-N-acetylbacillosamine transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.761
epsE_1
Putative glycosyltransferase EpsE.
  
 
 0.754
rffA
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.709
pglC
Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase.
 
 0.695
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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