Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
norGHTH-type transcriptional regulator NorG. (462 aa)    
Predicted Functional Partners:
ygaZ_1
Inner membrane protein YgaZ.
  
    0.562
ACWI_00790
Branched-chain amino acid transport protein (AzlD).
       0.538
ACWI_00760
Ribonuclease.
       0.531
ACWI_08320
Putative GTP cyclohydrolase 1 type 2; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
   
    0.521
pksJ
Polyketide synthase PksJ.
  
  
 0.481
ACWI_21100
Hypothetical protein.
    
   0.456
rsxB_4
Electron transport complex subunit RsxB.
    
   0.444
rsxB_5
Electron transport complex subunit RsxB.
    
   0.444
rsxB_6
Electron transport complex subunit RsxB.
    
   0.444
lon
Lon protease.
       0.406
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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