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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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[Homology]
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ACWI_00810Sugar-specific transcriptional regulator TrmB. (232 aa)    
Predicted Functional Partners:
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
   
    0.841
lysA
Diaminopimelate decarboxylase.
 
   
 0.837
ACWI_06230
Ferredoxin-2.
   
    0.604
dmsB
Anaerobic dimethyl sulfoxide reductase chain B.
   
    0.604
padI
NADH-dependent phenylglyoxylate dehydrogenase subunit beta.
   
    0.604
ACWI_10690
Hypothetical protein.
  
     0.504
ACWI_34650
Hypothetical protein.
  
     0.451
dapL
LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.
       0.448
ACWI_00800
MORN repeat protein.
       0.447
ACWI_34640
Transposase.
  
     0.428
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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