Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
nudLPutative nudix hydrolase NudL. (206 aa)    
Predicted Functional Partners:
ACWI_00870
Hypothetical protein.
       0.762
ACWI_00860
Putative DMT superfamily transporter inner membrane protein.
 
    0.689
yqjI
Transcriptional regulator YqjI.
       0.484
ACWI_00900
Hypothetical protein.
       0.484
fadB2
3-hydroxybutyryl-CoA dehydrogenase.
  
  
 0.460
mmgB
Putative 3-hydroxybutyryl-CoA dehydrogenase.
  
  
 0.453
echA8
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.449
wcaJ_3
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.415
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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