STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bfmBAB_12-oxoisovalerate dehydrogenase subunit beta. (333 aa)    
Predicted Functional Partners:
acoA_1
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
 0.999
lpd_4
Dihydrolipoyl dehydrogenase.
 
 0.998
acoA_2
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
 0.997
acoA_3
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
 0.997
acoA_4
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
 0.997
acoA_5
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
 0.997
pdhC_1
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex.
 
 0.985
prs_1
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.958
pdhC_4
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex.
 0.951
pdhC_5
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex.
 0.943
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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