STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mazGNucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG. (490 aa)    
Predicted Functional Partners:
barA_2
Signal transduction histidine-protein kinase BarA.
    
  0.837
barA_1
Signal transduction histidine-protein kinase BarA.
  
 
  0.833
ydaM_4
Putative diguanylate cyclase YdaM.
  
 
  0.799
spoVB
Stage V sporulation protein B.
  
    0.796
prkC_1
Serine/threonine-protein kinase PrkC.
  
 
 0.789
yegE_1
Putative diguanylate cyclase YegE.
  
 
  0.786
yegE_8
Putative diguanylate cyclase YegE.
  
 
  0.786
hslR
Heat shock protein 15.
  
    0.782
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.775
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 
  0.763
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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