Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ttgWPutative HTH-type transcriptional regulator TtgW. (198 aa)    
Predicted Functional Partners:
kstR2_2
HTH-type transcriptional repressor KstR2.
  
     0.695
kstR2_1
HTH-type transcriptional repressor KstR2.
  
     0.691
ACWI_02200
Flavodoxin.
       0.686
icaR_2
Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR.
  
     0.576
pksJ
Polyketide synthase PksJ.
 
   
 0.575
ACWI_02180
Hypothetical protein.
       0.531
ethR
HTH-type transcriptional regulator EthR.
  
     0.513
mtrR_1
HTH-type transcriptional regulator MtrR.
  
     0.477
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.409
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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