close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bceABacitracin export ATP-binding protein BceA. (232 aa)    
Predicted Functional Partners:
smc_2
Chromosome partition protein Smc.
 
 0.994
ACWI_02440
FtsX-like permease family protein.
 
 0.988
macB_2
Macrolide export ATP-binding/permease protein MacB.
 0.987
macB_5
Macrolide export ATP-binding/permease protein MacB.
 0.987
ytrF
ABC transporter permease YtrF precursor.
 0.983
ACWI_14650
Outer membrane-specific lipoprotein transporter subunit LolE.
 
 0.944
ddpD
Putative D,D-dipeptide transport ATP-binding protein DdpD; Belongs to the ABC transporter superfamily.
 
   
0.907
gsiA
Glutathione import ATP-binding protein GsiA.
 
    
0.900
lolE
Lipoprotein-releasing system transmembrane protein LolE.
 
 0.815
yecS_1
Inner membrane amino-acid ABC transporter permease protein YecS.
 
 
 
 0.798
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.