STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stp_1Multidrug resistance protein Stp; Belongs to the major facilitator superfamily. (487 aa)    
Predicted Functional Partners:
pksJ
Polyketide synthase PksJ.
  
 
 0.834
mexR_1
Multidrug resistance operon repressor.
 
  
 0.822
stp_3
Multidrug resistance protein Stp.
  
     0.596
bmr3_1
Multidrug resistance protein 3.
  
     0.573
pheA
P-protein.
   
 
 0.554
ACWI_25390
Hypothetical protein.
   
 
 0.554
davT
5-aminovalerate aminotransferase DavT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.507
metH_3
Methionine synthase.
   
 
  0.500
cls
Cardiolipin synthase.
  
 
 0.444
ydaM_1
Putative diguanylate cyclase YdaM.
       0.440
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.