STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_02740AAA domain (dynein-related subfamily). (306 aa)    
Predicted Functional Partners:
ACWI_02730
Cobalamin biosynthesis protein CobT VWA domain protein.
 
 
 0.985
ACWI_14180
Cobalamin biosynthesis protein CobT VWA domain protein.
 
 
 0.957
speA_1
Arginine decarboxylase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
 
 0.662
speA_2
Arginine decarboxylase.
   
 
 0.599
ubiE_2
Demethylmenaquinone methyltransferase.
  
     0.576
ACWI_04860
Hypothetical protein.
  
   
 0.550
ACWI_02540
Hypothetical protein.
  
     0.539
ACWI_32030
Hypothetical protein.
  
     0.530
ACWI_04670
Hypothetical protein.
  
     0.488
ACWI_00990
NAD-dependent malic enzyme.
   
    0.448
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
Server load: medium (42%) [HD]