STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_03280Hypothetical protein; BRO family, N-terminal domain. (258 aa)    
Predicted Functional Partners:
ACWI_03290
Hypothetical protein.
       0.718
ACWI_03270
Hypothetical protein.
       0.668
ACWI_03250
Hypothetical protein.
       0.618
ACWI_03260
Hypothetical protein.
       0.618
ACWI_27490
PD-(D/E)XK nuclease superfamily protein.
     
 0.593
ACWI_05350
Hypothetical protein.
  
    0.567
lexA_1
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
  
  
 0.565
lexA_2
LexA repressor; Belongs to the peptidase S24 family.
  
  
 0.565
ACWI_36120
Hypothetical protein.
 
    0.535
ACWI_03240
Hypothetical protein.
       0.530
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.