STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_03570Phage capsid family protein. (376 aa)    
Predicted Functional Partners:
ACWI_03550
Phage portal protein.
 
 
 
 0.969
ACWI_03560
Caudovirus prohead protease.
 
  
 0.942
ACWI_03590
Phage head-tail joining protein.
  
 
 0.887
ACWI_03530
Phage terminase.
 
   
 0.881
ACWI_31320
Phage portal protein.
 
 
 
 0.875
ACWI_03520
Phage terminase, small subunit.
 
   
 0.859
ACWI_33080
Phage portal protein.
 
 
 
 0.765
ACWI_03540
Hypothetical protein.
       0.762
ACWI_33070
Caudovirus prohead protease.
 
  
 0.755
ACWI_31310
Caudovirus prohead protease.
 
  
 0.747
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.