STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malTHTH-type transcriptional regulator MalT. (825 aa)    
Predicted Functional Partners:
patB
Cystathionine beta-lyase PatB.
    
   0.843
ACWI_18180
Type I restriction enzyme EcoKI subunit R.
  
     0.626
arsA_2
Arsenical pump-driving ATPase.
    
 
 0.607
ACWI_20410
Acid shock protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.607
ACWI_22220
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.540
ybiT_2
Putative ABC transporter ATP-binding protein YbiT.
       0.497
barA_1
Signal transduction histidine-protein kinase BarA.
  
   
 0.479
pksJ
Polyketide synthase PksJ.
     
 0.470
norV
Anaerobic nitric oxide reductase flavorubredoxin.
       0.461
pstB3
Phosphate import ATP-binding protein PstB 3; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
    
   0.456
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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