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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahpF_1Alkyl hydroperoxide reductase subunit F. (430 aa)    
Predicted Functional Partners:
glpA
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
 
 0.975
ACWI_04470
Hypothetical protein.
 
    0.966
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 0.921
sfrB_2
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 0.921
lhgO_1
L-2-hydroxyglutarate oxidase LhgO.
 
 0.918
lhgO_2
L-2-hydroxyglutarate oxidase LhgO.
 
 0.908
lhgO_3
L-2-hydroxyglutarate oxidase LhgO.
 
 0.907
ACWI_07340
Hypothetical protein.
    0.906
ACWI_07440
Hypothetical protein.
 
    0.859
trxA_1
Thioredoxin-1; Belongs to the thioredoxin family.
  
 0.844
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.