Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ecsA_1ABC-type transporter ATP-binding protein EcsA. (287 aa)    
Predicted Functional Partners:
ytrA_2
HTH-type transcriptional repressor YtrA.
  
 0.961
ytrA_4
HTH-type transcriptional repressor YtrA.
  
 0.841
ACWI_04560
Hypothetical protein.
       0.773
ACWI_24710
ABC-2 family transporter protein.
  
 
 0.729
ytrA_3
HTH-type transcriptional repressor YtrA.
 
  
 0.694
ACWI_24700
ABC-2 family transporter protein.
  
 
 0.653
ACWI_28440
ABC-2 family transporter protein.
  
 
 0.653
ACWI_31530
Hypothetical protein.
 
   
 0.626
lptB_2
Lipopolysaccharide export system ATP-binding protein LptB.
 
     
0.589
atpC_2
ATP synthase epsilon chain, sodium ion specific; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.551
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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