Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACWI_05310Zinc D-Ala-D-Ala carboxypeptidase precursor. (181 aa)    
Predicted Functional Partners:
ACWI_05320
Holin family protein.
       0.781
gloB_1
Hydroxyacylglutathione hydrolase.
  
    0.542
ACWI_18940
Putative metallo-hydrolase.
  
    0.542
gloB_2
Hydroxyacylglutathione hydrolase.
  
    0.542
qacR
HTH-type transcriptional regulator QacR.
  
   
 0.529
nasF
uroporphyrinogen-III C-methyltransferase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
       0.520
ttgR
HTH-type transcriptional regulator TtgR.
  
   
 0.502
ACWI_30770
tetR family regulatory protein.
  
   
 0.497
ACWI_05300
Hypothetical protein.
       0.474
mepM_5
Murein DD-endopeptidase MepM.
  
  
 0.448
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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