ACWI_05600 protein (Acetobacterium wieringae)

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Score

ACWI_05600

YacP-like NYN domain protein. (170 aa)

Predicted Functional Partners:

ACWI_05590

0.969

mrnC

0.930

sigH

0.907

fusA_2

0.899

fusA_1

0.896

cysS

0.856

ACWI_19030

0.766

ACWI_21350

0.642

rlmL

0.599

tufA_1

0.474

Your Current Organism:

Acetobacterium wieringae

NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACWI_05590	ACWI_05600	ACWI_05590	ACWI_05600	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	YacP-like NYN domain protein.	0.969
ACWI_05590	cysS	ACWI_05590	ACWI_01140	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.899
ACWI_05590	mrnC	ACWI_05590	ACWI_01150	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.865
ACWI_05590	rlmL	ACWI_05590	ACWI_05580	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribosomal RNA large subunit methyltransferase K/L; Belongs to the methyltransferase superfamily.	0.723
ACWI_05590	sigH	ACWI_05590	ACWI_05610	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family.	0.883
ACWI_05590	tufA_1	ACWI_05590	ACWI_05620	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.503
ACWI_05600	ACWI_05590	ACWI_05600	ACWI_05590	YacP-like NYN domain protein.	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.969
ACWI_05600	ACWI_19030	ACWI_05600	ACWI_19030	YacP-like NYN domain protein.	Hypothetical protein.	0.766
ACWI_05600	ACWI_21350	ACWI_05600	ACWI_21350	YacP-like NYN domain protein.	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.642
ACWI_05600	cysS	ACWI_05600	ACWI_01140	YacP-like NYN domain protein.	cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.856
ACWI_05600	fusA_1	ACWI_05600	ACWI_25830	YacP-like NYN domain protein.	Elongation factor G.	0.896
ACWI_05600	fusA_2	ACWI_05600	ACWI_34280	YacP-like NYN domain protein.	Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.	0.899
ACWI_05600	mrnC	ACWI_05600	ACWI_01150	YacP-like NYN domain protein.	Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.930
ACWI_05600	rlmL	ACWI_05600	ACWI_05580	YacP-like NYN domain protein.	Ribosomal RNA large subunit methyltransferase K/L; Belongs to the methyltransferase superfamily.	0.599
ACWI_05600	sigH	ACWI_05600	ACWI_05610	YacP-like NYN domain protein.	RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family.	0.907
ACWI_05600	tufA_1	ACWI_05600	ACWI_05620	YacP-like NYN domain protein.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.474
ACWI_19030	ACWI_05600	ACWI_19030	ACWI_05600	Hypothetical protein.	YacP-like NYN domain protein.	0.766
ACWI_19030	mrnC	ACWI_19030	ACWI_01150	Hypothetical protein.	Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.776
ACWI_19030	rlmL	ACWI_19030	ACWI_05580	Hypothetical protein.	Ribosomal RNA large subunit methyltransferase K/L; Belongs to the methyltransferase superfamily.	0.425
ACWI_21350	ACWI_05600	ACWI_21350	ACWI_05600	Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	YacP-like NYN domain protein.	0.642