Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hrbHigh molecular weight rubredoxin. (245 aa)    
Predicted Functional Partners:
ngr
Nigerythrin.
    
 0.933
fprA
Nitric oxide reductase.
  
 0.933
rbr1
Rubrerythrin-1.
    
 0.907
tsaM1
Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1.
   
 0.801
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.687
norV
Anaerobic nitric oxide reductase flavorubredoxin.
 
  
 0.677
ACWI_18020
Rubredoxin.
  
  
 0.643
cdr_4
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
     
 0.604
ACWI_31590
Putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein.
  
  
 0.562
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.557
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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