STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_06320Trimethylamine methyltransferase (MTTB). (476 aa)    
Predicted Functional Partners:
ACWI_06310
Trimethylamine methyltransferase (MTTB).
 
  
 
0.975
metH_27
Methionine synthase.
  
 
  0.930
ACWI_35400
Trimethylamine methyltransferase (MTTB).
  
  
 
0.921
metH_6
Methionine synthase.
   
  0.920
ACWI_06330
Hypothetical protein.
 
     0.844
ACWI_34390
Hypothetical protein.
 
     0.717
nqrF_1
Na(+)-translocating NADH-quinone reductase subunit F.
 
     0.650
ACWI_08860
Hypothetical protein.
 
     0.642
ascD
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase.
 
     0.641
apc3_2
Acetophenone carboxylase gamma subunit.
  
     0.523
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.