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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_06330Hypothetical protein. (259 aa)    
Predicted Functional Partners:
ACWI_06310
Trimethylamine methyltransferase (MTTB).
 
     0.853
ACWI_06320
Trimethylamine methyltransferase (MTTB).
 
     0.844
odh
Opine dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
     0.731
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
    
 0.582
ACWI_35450
Trimethylamine methyltransferase (MTTB).
  
     0.581
pgdA
peptidoglycan-N-acetylglucosamine deacetylase.
    
  0.570
ACWI_35400
Trimethylamine methyltransferase (MTTB).
  
     0.495
hemE_1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.448
ACWI_30660
Putative redox-active protein; C_GCAxxG_C_C.
  
     0.437
ttgR
HTH-type transcriptional regulator TtgR.
  
     0.436
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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