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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metH_4Methionine synthase. (207 aa)    
Predicted Functional Partners:
acsE_6
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
 
 0.964
acsE_2
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
 0.954
acsE_5
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
 
 0.945
acsE_13
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
 
 0.942
acsE_12
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
 
 0.935
acsE_4
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
 
 0.908
acsE_7
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
 
 0.764
acsE_9
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
 
 
 0.749
acsE_10
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
 
 
 0.726
panB_1
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
       0.705
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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