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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hndDNADP-reducing hydrogenase subunit HndC. (583 aa)    
Predicted Functional Partners:
hndC_1
NADP-reducing hydrogenase subunit HndC.
 0.999
hndA_2
NADP-reducing hydrogenase subunit HndA.
 0.998
hndC_2
NADP-reducing hydrogenase subunit HndC.
 0.998
hndA_4
NADP-reducing hydrogenase subunit HndA.
 0.994
hndB
NADP-reducing hydrogenase subunit HndB.
 
 0.993
hndA_1
NADP-reducing hydrogenase subunit HndA.
 0.988
hndA_3
NADP-reducing hydrogenase subunit HndA.
 0.988
rsxB_2
Electron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 0.986
ACWI_35610
Iron hydrogenase 1.
 
 
0.986
ngr
Nigerythrin.
 
 0.981
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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