STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_07160Hypothetical protein; Glycosyltransferase family 28 N-terminal domain. (424 aa)    
Predicted Functional Partners:
pksJ
Polyketide synthase PksJ.
 
  
 0.840
lgrD
Linear gramicidin synthase subunit D; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.761
barA_3
Signal transduction histidine-protein kinase BarA.
  
   
 0.521
ydcP_1
Putative protease YdcP precursor.
       0.467
mutS2
Endonuclease MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.448
bmr3_2
Multidrug resistance protein 3.
  
   
 0.445
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
   
 0.444
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
   
 0.427
barA_2
Signal transduction histidine-protein kinase BarA.
  
   
 0.424
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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