STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lhgO_1L-2-hydroxyglutarate oxidase LhgO. (490 aa)    
Predicted Functional Partners:
ahpF_2
NADH dehydrogenase.
  
 0.967
ACWI_07340
Hypothetical protein.
 
    0.958
plsY
Putative glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
     
 0.904
ahpF_1
Alkyl hydroperoxide reductase subunit F.
  
 0.893
ahpF_3
NADH dehydrogenase.
  
 0.870
ACWI_07440
Hypothetical protein.
 
    0.826
ACWI_04470
Hypothetical protein.
 
    0.821
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
 0.817
ACWI_07310
Glycerol-3-phosphate responsive antiterminator.
 
     0.699
dhaM_1
PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM.
    
  0.618
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.