Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
ahpF_3NADH dehydrogenase. (425 aa)    
Predicted Functional Partners:
lhgO_2
L-2-hydroxyglutarate oxidase LhgO.
  
 0.970
ACWI_07440
Hypothetical protein.
 
    0.964
ACWI_07340
Hypothetical protein.
    0.922
lhgO_3
L-2-hydroxyglutarate oxidase LhgO.
  
 0.875
lhgO_1
L-2-hydroxyglutarate oxidase LhgO.
  
 0.870
ACWI_04470
Hypothetical protein.
 
    0.863
glpA
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
  
 0.846
mlr
4-methylaminobutanoate oxidase (formaldehyde-forming).
   
 0.693
trxA_1
Thioredoxin-1; Belongs to the thioredoxin family.
  
 
 0.685
trxA_2
Thioredoxin-1; Belongs to the thioredoxin family.
  
 
 0.685
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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