Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACWI_07540Transaldolase. (438 aa)    
Predicted Functional Partners:
dxs_3
1-deoxy-D-xylulose-5-phosphate synthase.
  
 
 0.876
tkt
Transketolase.
    
 0.873
tpiA_1
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.853
tpiA_2
Triosephosphate isomerase.
  
 
 0.853
pgiB
Glucose-6-phosphate isomerase B; Belongs to the GPI family.
  
 
 0.841
fba_1
Fructose-bisphosphate aldolase.
  
 
 0.805
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.763
pheA
P-protein.
  
 
 0.741
ACWI_25390
Hypothetical protein.
  
 
 0.741
gltB_1
Ferredoxin-dependent glutamate synthase 1.
  
  
 0.718
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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