STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_07680Holin family protein. (143 aa)    
Predicted Functional Partners:
ACWI_07670
Clostridial hydrophobic W.
  
    0.832
ACWI_07690
Hypothetical protein.
       0.658
ACWI_33680
Tropomyosin like protein.
 
    0.649
dpnM
Modification methylase DpnIIA.
       0.508
tnpR_1
Transposon Tn3 resolvase.
 
  
 0.466
ACWI_33770
Phage capsid family protein.
 
    0.458
ACWI_33910
Hypothetical protein.
 
    0.453
ACWI_33820
Phage terminase.
 
   
 0.439
tnpR_2
Transposon Tn3 resolvase.
 
  
 0.430
ACWI_33660
Prophage endopeptidase tail.
  
    0.429
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.