Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trxBThioredoxin reductase. (305 aa)    
Predicted Functional Partners:
trxA_3
Thioredoxin-1; Belongs to the thioredoxin family.
 
 
 0.987
trxA_1
Thioredoxin-1; Belongs to the thioredoxin family.
 
 0.984
trxA_2
Thioredoxin-1; Belongs to the thioredoxin family.
 
 
 0.900
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.675
sfrB_2
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.675
yscN
Putative ATP synthase YscN.
       0.655
ACWI_08040
Flagellar FliJ protein.
       0.655
fliG
Flagellar motor switch protein FliG.
       0.647
serS
serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
 
  
 0.634
ACWI_08020
Flagellar assembly protein H.
       0.633
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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