Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sorC_1Sorbitol operon regulator. (336 aa)    
Predicted Functional Partners:
dhaK_4
PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK.
     0.918
dhaK_1
PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK.
      0.898
dhaK_3
PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK.
     0.824
yutF
Putative hydrolase YutF.
       0.781
dhaK_2
PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK.
      0.597
ptsH
Phosphocarrier protein HPr.
     
 0.528
lsrF
Putative aldolase LsrF.
 
  
 0.506
glnB_3
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
       0.449
lyx
L-xylulose/3-keto-L-gulonate kinase; Belongs to the FGGY kinase family.
 
  
 0.429
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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