STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrgA_1Ammonium transporter NrgA. (417 aa)    
Predicted Functional Partners:
glnB_3
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.949
glnB_4
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 
 0.867
glnB_5
Nitrogen regulatory protein P-II.
 
 
 0.864
glnB_1
Nitrogen regulatory protein P-II.
  
 
 0.823
glnB_2
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
  
 
 0.823
ACWI_14220
Nitrogen regulatory protein P-II.
  
 
 0.823
ACWI_20160
Hypothetical protein.
  
 
 0.823
gltB_1
Ferredoxin-dependent glutamate synthase 1.
 
  
 0.787
glnA_1
Glutamine synthetase.
  
  
 0.515
cph2_9
Phytochrome-like protein cph2.
 
      0.499
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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