STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_08970Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family. (476 aa)    
Predicted Functional Partners:
ACWI_08990
Tetrahydromethanopterin S-methyltransferase subunit H.
 
  
 0.927
metH_6
Methionine synthase.
  
  0.881
ACWI_34390
Hypothetical protein.
 
     0.732
nqrF_1
Na(+)-translocating NADH-quinone reductase subunit F.
 
     0.721
opuD_1
Glycine betaine transporter OpuD; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.714
ACWI_08860
Hypothetical protein.
 
     0.675
ascD
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase.
 
     0.659
nqrF_2
Na(+)-translocating NADH-quinone reductase subunit F.
 
     0.634
apc3_2
Acetophenone carboxylase gamma subunit.
  
     0.553
metH_11
Methionine synthase.
 
   
  0.537
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.