Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_09050Hypothetical protein. (190 aa)    
Predicted Functional Partners:
ACWI_00920
Hypothetical protein.
    
   0.668
ppiB
Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.668
ftsH_2
ATP-dependent zinc metalloprotease FtsH; Belongs to the AAA ATPase family.
    
   0.661
stp_2
Serine/threonine phosphatase stp.
    
   0.636
ACWI_36310
Hypothetical protein.
    
   0.636
ndk
Nucleoside diphosphate kinase; Belongs to the NDK family.
    
 
 0.630
ndkA
Nucleoside diphosphate kinase; Belongs to the NDK family.
    
 
 0.630
ACWI_07100
Hypothetical protein.
    
   0.623
ACWI_12220
Cellulose synthase regulator protein.
    
   0.623
dnaJ_1
Chaperone protein DnaJ.
    
 
 0.611
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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